Top 10 Best CRM for E-Commerce Companies with WhatsApp API Integration

Top 10 Best CRM for E-Commerce Companies with WhatsApp API Integration

E-Commerce Tools

Top 10 Best CRM for
E-Commerce Companies in 2025

We tested and ranked the best CRM tools to help you sell more, retain customers, and grow faster — all with INR pricing.

Updated: May 2025 12 min read INR Pricing Expert Reviewed
What is a CRM for e-commerce? A CRM (Customer Relationship Management) tool helps online stores track customers, send the right messages, recover lost sales, and understand what people are buying. If you run a Shopify store, a CRM can be the difference between a one-time buyer and a loyal customer who comes back again and again.

The 10 Best CRM Tools for E-Commerce

  1. 1

    Cleomitra

    All-in-one CRM built for Indian e-commerce businesses

    Visit Site

    Cleomitra is a smart CRM made for Indian online stores. It understands the way Indian customers shop — from WhatsApp conversations to COD orders — and gives you tools to manage everything in one place. If you sell on Shopify or your own website and want to grow in India, Cleomitra is a great starting point.

    It helps you see who your best customers are, send personalised messages at the right time, and recover carts that were left behind. The dashboard is clean and easy to understand, even if you're not a tech person.

    Key Features

    • WhatsApp & email automation
    • Customer segmentation
    • Abandoned cart recovery
    • Order & returns tracking
    • Shopify native integration

    Best For

    • D2C brands in India
    • Small to mid-size stores
    • WhatsApp-first businesses
    • Hindi + English support
    Free Trial Available Paid Plans from ₹999/month
    Future Outlook: Strong AI automation roadmap for Indian market; WhatsApp commerce integration is a big differentiator
  2. 2

    HubSpot CRM

    The world's most popular free CRM with powerful marketing tools

    Visit Site

    HubSpot is one of the biggest names in CRM globally. Their free plan is genuinely useful, and if you need more features like email campaigns, pipelines, and automation, the paid plans are worth it. It works with Shopify through an official plugin and gives you a full view of every customer.

    HubSpot is especially good for businesses that want to combine marketing, sales, and support in one tool. The learning curve is a bit steep at the start, but once you're in, it's very powerful.

    Key Features

    • Free CRM forever plan
    • Email marketing & sequences
    • Sales pipeline management
    • Live chat & chatbot
    • Shopify & WooCommerce sync

    Best For

    • Growing e-commerce brands
    • Businesses with sales teams
    • Content-led stores
    Free Plan Available Starter from ₹1,650/month
    Future Outlook: Heavy investment in AI sales assistants and predictive lead scoring across all tiers
  3. 3

    Klaviyo

    Email & SMS CRM purpose-built for e-commerce

    Visit Site

    Klaviyo is the favourite CRM of Shopify stores worldwide. It connects directly with your store and uses real shopping data to send emails and SMS messages that feel personal. If you want to send "You left something in your cart" or "Your favourite item is back in stock" messages automatically, Klaviyo does it brilliantly.

    Key Features

    • Deep Shopify data sync
    • Behaviour-based email flows
    • SMS marketing included
    • Revenue attribution
    • A/B testing

    Best For

    • Shopify-first stores
    • Email-heavy marketing
    • Fashion, beauty, lifestyle
    Free up to 250 contacts Email from ₹1,700/month
    Future Outlook: AI product recommendations and real-time personalisation engine being rolled out in 2025
  4. 4

    Zoho CRM

    India's own CRM powerhouse — great value for money

    Visit Site

    Zoho CRM is made in India and is one of the most affordable CRM tools available. It has all the features a growing e-commerce business needs — leads, automation, reports, and even a built-in AI assistant called Zia. Indian businesses love Zoho because you get a lot for a small price, and the support team understands local business needs.

    Key Features

    • AI assistant (Zia)
    • Omnichannel communication
    • Custom workflows
    • Sales forecasting
    • GST-ready invoicing

    Best For

    • Budget-conscious brands
    • Indian SMBs
    • Teams using Zoho suite
    Free for 3 users Standard from ₹800/user/month
    Future Outlook: Zia AI is getting smarter — expect deep predictive analytics for Indian market behaviour
  5. 5

    Salesforce Commerce Cloud

    Enterprise-grade CRM for large e-commerce operations

    Visit Site

    Salesforce is the world's largest CRM company. If you run a big e-commerce operation with a large team, Salesforce gives you unmatched power and customisation. It's not cheap, but enterprises that use it see big returns on customer retention and revenue.

    Key Features

    • Einstein AI personalisation
    • 360° customer view
    • Advanced order management
    • Loyalty programme tools
    • Deep reporting & BI

    Best For

    • Large online retailers
    • Omnichannel brands
    • Enterprise teams (50+ staff)
    Starter from ₹2,000/user/month
    Future Outlook: Agentforce (AI agents for sales & service) is Salesforce's biggest bet — will reshape how CRMs work by 2026
  6. 6

    Freshsales (Freshworks)

    AI-powered CRM from India's Freshworks

    Visit Site

    Freshsales is built by Chennai-based Freshworks — one of India's most successful software companies. It's modern, easy to use, and comes with an AI assistant called Freddy. For e-commerce businesses that want a fast setup without complexity, Freshsales is a very good option.

    Key Features

    • Freddy AI scoring
    • Built-in phone & email
    • Deal pipeline views
    • Auto-enrichment of contacts
    • Mobile app for field teams

    Best For

    • Fast-growing D2C brands
    • Teams wanting easy UI
    • Indian startups
    Free plan for small teams Growth from ₹999/user/month
    Future Outlook: Freddy AI will evolve into a full autonomous sales agent — great for lean teams
  7. 7

    Drip

    E-commerce CRM focused on revenue-driving automation

    Visit Site

    Drip calls itself an ECRM — a CRM built specifically for e-commerce. It connects with your Shopify or WooCommerce store and lets you run email campaigns based on exactly what people buy, browse, or leave behind. It's a smart choice for stores that want maximum ROI from email marketing.

    Key Features

    • Visual automation builder
    • On-site pop-ups & forms
    • Purchase intent tracking
    • Pre-built e-com workflows
    • Facebook & Instagram sync

    Best For

    • Email marketing-first stores
    • Stores with 1,000+ contacts
    • Shopify/WooCommerce users
    14-day free trial From ₹1,600/month (2,500 contacts)
    Future Outlook: Social commerce integrations with Instagram Shopping and YouTube are in the pipeline
  8. 8

    Pipedrive

    Visual sales pipeline CRM loved by small businesses

    Visit Site

    Pipedrive is a visual, drag-and-drop CRM that makes managing customer deals feel almost fun. While it's often used by B2B companies, many e-commerce businesses use it to manage their wholesale accounts, B2B customers, and VIP buyers. It's simple, effective, and affordable.

    Key Features

    • Visual Kanban pipeline
    • Activity reminders
    • AI deal insights
    • Email tracking & templates
    • 500+ integrations

    Best For

    • B2B & wholesale sellers
    • Small sales teams
    • Simple deal tracking
    14-day free trial Essential from ₹1,100/user/month
    Future Outlook: Adding more AI-driven deal forecasting and next-action suggestions throughout 2025
  9. 9

    Omnisend

    Multi-channel marketing CRM for Shopify sellers

    Visit Site

    Omnisend is designed specifically for online shops. It lets you market across email, SMS, and push notifications from one single dashboard. The automation features are excellent — you can set up welcome series, cart recovery, and win-back campaigns in minutes without any coding.

    Key Features

    • Email + SMS + push in one
    • Pre-built automation flows
    • Product picker for emails
    • Spin-to-win pop-ups
    • Shopify app store ready

    Best For

    • Multi-channel marketers
    • Stores wanting SMS fast
    • New Shopify merchants
    Free up to 250 contacts Standard from ₹1,300/month
    Future Outlook: Push notification commerce and AI-generated subject lines are being released in 2025
  10. 10

    ActiveCampaign

    Advanced automation CRM for serious e-commerce growth

    Visit Site

    ActiveCampaign is known as one of the best marketing automation tools in the world. It goes beyond email and CRM — you can create complex customer journeys based on any action a customer takes. If you want your marketing to feel like it's reading your customer's mind, ActiveCampaign can get you there.

    Key Features

    • 900+ automation recipes
    • Predictive sending & content
    • Site tracking
    • Deep Shopify integration
    • Split automation testing

    Best For

    • Power marketers
    • Stores with complex funnels
    • Subscription box businesses
    14-day free trial Starter from ₹1,200/month
    Future Outlook: AI-driven automation builder launched in 2024 — will make complex journeys accessible to everyone

CRM Pricing & Features at a Glance

All prices in INR per month. Pricing approximate as of May 2025.
# CRM Tool Starting Price (INR) Free Plan Best For Shopify Ready
1 Cleomitra ₹999/mo ✓ Trial Indian D2C brands ✓ Yes
2 HubSpot CRM ₹1,650/mo ✓ Yes Growing brands ✓ Yes
3 Klaviyo ₹1,700/mo ✓ 250 contacts Email marketing ✓ Native
4 Zoho CRM ₹800/user/mo ✓ 3 users Budget-conscious SMBs ✓ Yes
5 Salesforce ₹2,000/user/mo ✗ No Large enterprises ✓ Yes
6 Freshsales ₹999/user/mo ✓ Yes Indian startups ✓ Yes
7 Drip ₹1,600/mo ✗ Trial only Email-led stores ✓ Yes
8 Pipedrive ₹1,100/user/mo ✗ Trial only B2B & wholesale Via integrations
9 Omnisend ₹1,300/mo ✓ 250 contacts Multi-channel ✓ Native
10 ActiveCampaign ₹1,200/mo ✗ Trial only Complex automation ✓ Yes

The Future of CRM in E-Commerce

CRM is changing fast. Here's what to expect over the next 2–3 years.

AI Will Do the Work

Soon, your CRM will not just show you data — it will take action on its own. AI agents will send follow-ups, answer customer queries, and even process returns without any human input.

WhatsApp as CRM Channel

In India especially, WhatsApp is where customers live. CRMs that work natively inside WhatsApp — like Cleomitra — will have a huge edge over email-only tools.

Hyper-Personalisation

Generic "Dear Customer" emails are dead. Future CRMs will send the right message at the right second, based on what you looked at, when you last bought, and even the weather in your city.

Privacy-First Data

As third-party cookies go away, CRMs that help you collect first-party data directly from your own customers will become the most valuable tools in your marketing stack.

Voice & Video Commerce

CRMs will track interactions from YouTube live streams, Instagram reels, and even voice assistants. Every touchpoint will be linked to one customer profile.

India-Specific Growth

With 200M+ online shoppers in India and growing, local CRMs that understand Bharat — regional languages, UPI payments, tier-2 city behaviour — will see massive demand.